View source for Modifying EPA EMF SMOKE Platform for LADCO

=Modifications needed for modeling=

==Scripting Modifications==


Here is the script to convert EPA's Scripts in LADCO's Scripts. 

 foreach sname (Annual_afdust_NAMENAME.csh Annual_afdust_adj_NAMENAME.csh Annual_cmv_c1c2_12US1_2016ff_16j.csh Annual_np_oilgas_NAMENAME.csh Annual_othafdust_NAMENAME.csh Annual_othafdust_adj_NAMENAME.csh Annual_rail_NAMENAME.csh Annual_rwc_NAMENAME.csh Monthly_ag_NAMENAME.csh Monthly_nonroad_NAMENAME.csh Monthly_onroad_can_NAMENAME.csh Monthly_onroad_mex_NAMENAME.csh Monthly_onroad_mex_NAMENAME_part2_combine.csh Monthly_othar_NAMENAME.csh)
 echo "Working on :" $sname 
 
 setenv INNAME `echo $sname | sed s/NAMENAME/12US1_2016fh_16j/g`
 setenv OUTNAME `echo $sname | sed s/NAMENAME/ladco_2016_v1/g`
 
 #ls $INNAME
 #echo $OUTNAME
 
 cat $INNAME | sed s/griddesc_lambertonly_18jan2019_v7.txt/griddesc_lambertonly_aug302019_v8_LADCO.txt/g  | sed s/2016fh_16j/2016_ladco_v1/g | sed s/directory_definitions.csh/directory_definitions.12US2.csh/g | sed s/smoke4.7/smoke4.6/g  >  $OUTNAME
 
 end

======
For C1C2 marine script
Changed 
    setenv SECTORLIST "$CASESCRIPTS/sectorlist_2016ff_12dec2018_v1"
to 
    setenv SECTORLIST "$CASESCRIPTS/sectorlist_2016fh_02aug2019_v0

==Files that needed to be added==

 ge_dat/gridding/agref_us_2014platform_03dec2018_nf_v11.txt
 ge_dat/temporal/amptref_general_2014platform_tref_07dec2018_nf_v15
 ge_dat/costcy_for_2007platform_28nov2018_nf_v23.txt
 2016fh_16j/inputs/cmv_c1c2/*
 ge_dat/costcy_for_2007platform_28nov2018_nf_v23.txt
 ge_dat/gridding/srgdesc_CONUS12_2014_v1_3_29nov2016_13oct2017_v1.txt 
 ge_dat/smkreport/sccdesc_2014platform_07dec2018_nf_v2.txt
 ge_dat/speciation/gscnv_Create_Speciate4_5_CB6CMAQ_04jan2018_nf_v1.txt 
 ge_dat/gridding/surrogates/CONUS12_2014_03dec2018/USA_100_NOFILL.txt 
 ge_dat/smkreport/repconfig_area_inv_2011platform_11aug2014_v0.txt 
 ge_dat/smkreport/repconfig_area_invgrid_2011platform_11aug2014_v0.txt 
 ge_dat/smkreport/repconfig_area_inv2_2011platform_11aug2014_v0.txt 
 ge_dat/gridding/artopnt_2002detroit_30mar2012_v1.txt
 ge_dat/gridding/griddesc_lambertonly_29nov2018_nf_v7.txt
 ge_dat/invtable_2014platform_integrate_27nov2018_nf_v3.txt

Mexico_2016_onroad_MOVES_interpolated_02mar2018_v0.csv

Everything in 

 ge_dat/gridding/surrogates/CONUS12_2014_03dec2018/*

==Area Sources==

=Smoke Compile and source code notes=

When I compare the source code from EPA with the Code downloaded from Github I get the following differences. 

 Files assigns/ASSIGNS.EDGAR.cmaq.cb05_soa.HEMI_108k and ../assigns/ASSIGNS.EDGAR.cmaq.cb05_soa.HEMI_108k differ
 Only in ../assigns: ASSIGNS.emf
 Files assigns/ASSIGNS.nctox.cmaq.cb05_soa.us12-nc and ../assigns/ASSIGNS.nctox.cmaq.cb05_soa.us12-nc differ
 Only in ../assigns: check_settings.csh
 Only in ../assigns: runsettings.csh
 Only in ../assigns: set_dirs.csh
 Files assigns/smk_mkdir and ../assigns/smk_mkdir differ
 Only in ../assigns: smk_mkdir_unc
 Only in ../assigns: smk_rmfiles_v3.scr

In scripts the differences are: 

 Only in scripts: aermod
 Only in ../scripts: afdust_adj
 Only in ../scripts: annual_report
 Only in ../scripts: emf
 Only in ../scripts: emisqa
 Only in scripts: install
 Only in ../scripts: log_analyzer
 Only in ../scripts: platform
 Common subdirectories: scripts/run and ../scripts/run
 Only in ../scripts: smk_dates

So it would appear that simply pulling SMOKE from CMAS is not enough you must include EPA's versions of those folders. 


I also created a short script called testenv.csh which looks at environment variables that have file names on our primary drive "t5" and looks for their existence and lists all the files that don't exist into missing.txt. Handling of directory references is not working great but it is pretty easy to see any glaring problem areas.  

Here is my script

 #!/bin/csh -f
 echo "" > missing.txt 
 for file in `printenv | cut -d'=' -f2 | grep t5 | grep -v ":" ` 
 do
    [ ! -d $file ] && [ ! -f $file ] && echo "File $file DOES NOT exists." >> missing.txt   
 done